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Transactions on computational systems biology VIII 1st Edition by Corrado Priami ISBN 9783540766384

  • SKU: BELL-20009668
Transactions on computational systems biology VIII 1st Edition by Corrado Priami ISBN 9783540766384
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Transactions on computational systems biology VIII 1st Edition by Corrado Priami ISBN 9783540766384 instant download after payment.

Publisher: Springer
File Extension: PDF
File size: 11.2 MB
Pages: 101
Author: Priami, Corrado(Editor)
ISBN: 9783540766384, 9783540766391, 3540766383, 3540766391
Language: English
Year: 2007

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Transactions on computational systems biology VIII 1st Edition by Corrado Priami ISBN 9783540766384 by Priami, Corrado(editor) 9783540766384, 9783540766391, 3540766383, 3540766391 instant download after payment.

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ISBN 13: 9783540766384
Author: Corrado Priami

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences. It supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena. The six papers selected for this special issue cover a broad range of topics.

Transactions on computational systems biology VIII 1st Table of contents:

  1. Introduction
  2. Shifting Paradigms: Network-Centric Operation and Control
  3. Need for Network-Centric Control
  4. An Excursion to Nature - Cellular Signaling Pathways
  5. Rule-Based State Machine for Localized Actuation Control
  6. Data-Centric Operation
  7. Specific Reaction on Received Data
  8. Simple Local Behavior Control
  9. Case Studies
  10. Discussion
  11. Conclusion
  12. References
  13. A Computationally Fast and Parametric Model to Estimate Protein-Ligand Docking Time for Stochastic E
  14. Introduction
  15. Related Works
  16. Analytical Model: Ligand-Protein Docking
  17. Rotation of the Ligand Axis with Respect to Protein A
  18. Assumptions
  19. Finding $theta_{avg}$
  20. Computing $theta_{avg}$ Using a 3-D Coordinate System
  21. Calculating $pb$
  22. Computing the Time Taken for Protein-Ligand Docking
  23. Time Taken for the Ligand to Collide with the Binding Site of the Protein Molecule with Enough Activ
  24. Finding the Average Time for Rotation of Ligand Axis
  25. The General Distribution for the Total Time for Protein-Ligand Docking
  26. Results and Analysis
  27. Problems in Validation of Our Model
  28. Numerical Results
  29. Important Observations
  30. Discussion
  31. Limitations of Our Model
  32. Biological Implications
  33. Conclusion
  34. References
  35. Equation-Based Congestion Control in the Internet Biologic Environment
  36. Introduction
  37. A Conceptual Framework: Internet as an Ecosystem Analogy
  38. Internet Ecology
  39. Types of Population Interactions
  40. Evaluation Parameters
  41. Predator-Prey Approach: Congestion Control Using Predator-Prey Model
  42. Illustrative Example
  43. Hybrid Approach: Congestion Control Using Combination of Competition and Predator-Prey Models
  44. Illustrative Example
  45. Implementation Issues
  46. How Does System Biology Benefit from This Contribution?
  47. Conclusion Remarks
  48. References
  49. Computational Thinking in Biology
  50. Introduction
  51. Abstracting Biological Systems
  52. The $beta$ Workbench
  53. Potentials
  54. Conclusions
  55. End-to-End Information Management for Systems Biology
  56. Introduction
  57. Related Work
  58. Data Management
  59. Software Engineering Tools
  60. Collaboration Tools
  61. Model Repositories
  62. Architecture Description
  63. Tool Support
  64. Web Tools
  65. Model Run Manager
  66. Other Supporting Software
  67. Implementation Details
  68. Model Service
  69. Parameter Service
  70. Interpretation Service
  71. Model Execution
  72. Case Study
  73. Model Description
  74. Composite Modelling
  75. Modelling Use Cases
  76. Summary and Conclusions
  77. References
  78. On Differentiation and Homeostatic Behaviours of Boolean Dynamical Systems
  79. Introduction
  80. Thomas' Rules and Stability Under Projection
  81. Preliminaries
  82. Stability Under Projection
  83. Disjoint Stable Subspaces and Positive Circuits
  84. Dynamic Cycles and Negative Circuits
  85. References
  86. Author Index

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Tags: Corrado Priami, Transactions, computational

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